WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H8.1b.1 Sequence Name  T21H8.1b.1
Length (nt)  3390   Chromosome Location  X: 13865038-13872742
Chromosome . Primary Identifier  X Chromosome Location . Start  13865038
Chromosome Location . End  13872742 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011904 hlb-1 T21H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.1b T21H8.1b 2889   X: 13865539-13865577

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1b.1 13865038 13872742 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258502   540   X: 13865038-13865577 Caenorhabditis elegans
Exon258515   111   X: 13865744-13865854 Caenorhabditis elegans
Exon258532   189   X: 13865906-13866094 Caenorhabditis elegans
Exon258549   138   X: 13866400-13866537 Caenorhabditis elegans
Exon258566   707   X: 13866590-13867296 Caenorhabditis elegans
Exon258582   187   X: 13867906-13868092 Caenorhabditis elegans
Exon258600   127   X: 13868147-13868273 Caenorhabditis elegans
Exon258617   314   X: 13868448-13868761 Caenorhabditis elegans
Exon258636   246   X: 13868859-13869104 Caenorhabditis elegans
Exon258651   141   X: 13869748-13869888 Caenorhabditis elegans
Exon258664   114   X: 13870263-13870376 Caenorhabditis elegans
Exon258679   102   X: 13870431-13870532 Caenorhabditis elegans
Exon258696   286   X: 13871712-13871997 Caenorhabditis elegans
Exon258699   188   X: 13872555-13872742 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1b.1 13865038 13872742 -1

1 Sequence

Length
3390

1 Sequence Ontology Term

Identifier Name Description
transcript