WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H8.1k.2 Sequence Name  T21H8.1k.2
Length (nt)  3223   Chromosome Location  X: 13865055-13877583
Chromosome . Primary Identifier  X Chromosome Location . Start  13865055
Chromosome Location . End  13877583 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H8.1k.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011904 hlb-1 T21H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.1k T21H8.1k 2613   X: 13865539-13865577

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1k.2 13865055 13877583 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258504   523   X: 13865055-13865577 Caenorhabditis elegans
Exon258525   111   X: 13865744-13865854 Caenorhabditis elegans
Exon258542   189   X: 13865906-13866094 Caenorhabditis elegans
Exon258559   138   X: 13866400-13866537 Caenorhabditis elegans
Exon258576   707   X: 13866590-13867296 Caenorhabditis elegans
Exon258596   61   X: 13868032-13868092 Caenorhabditis elegans
Exon258610   127   X: 13868147-13868273 Caenorhabditis elegans
Exon258627   314   X: 13868448-13868761 Caenorhabditis elegans
Exon258644   246   X: 13868859-13869104 Caenorhabditis elegans
Exon258657   141   X: 13869748-13869888 Caenorhabditis elegans
Exon258672   114   X: 13870263-13870376 Caenorhabditis elegans
Exon258687   102   X: 13870431-13870532 Caenorhabditis elegans
Exon258715   188   X: 13876517-13876704 Caenorhabditis elegans
Exon258722   87   X: 13877266-13877352 Caenorhabditis elegans
Exon258736   175   X: 13877409-13877583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1k.2 13865055 13877583 -1

1 Sequence

Length
3223

1 Sequence Ontology Term

Identifier Name Description
transcript