WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H8.1h.1 Sequence Name  T21H8.1h.1
Length (nt)  3459   Chromosome Location  X: 13865095-13882693
Chromosome . Primary Identifier  X Chromosome Location . Start  13865095
Chromosome Location . End  13882693 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H8.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011904 hlb-1 T21H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.1h T21H8.1h 3015   X: 13865539-13865577

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T21H8.1h.1 13865095 13882693 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258505   483   X: 13865095-13865577 Caenorhabditis elegans
Exon258521   111   X: 13865744-13865854 Caenorhabditis elegans
Exon258538   189   X: 13865906-13866094 Caenorhabditis elegans
Exon258555   138   X: 13866400-13866537 Caenorhabditis elegans
Exon258572   707   X: 13866590-13867296 Caenorhabditis elegans
Exon258585   187   X: 13867906-13868092 Caenorhabditis elegans
Exon258606   127   X: 13868147-13868273 Caenorhabditis elegans
Exon258623   314   X: 13868448-13868761 Caenorhabditis elegans
Exon258640   246   X: 13868859-13869104 Caenorhabditis elegans
Exon258653   141   X: 13869748-13869888 Caenorhabditis elegans
Exon258668   114   X: 13870263-13870376 Caenorhabditis elegans
Exon258683   102   X: 13870431-13870532 Caenorhabditis elegans
Exon258711   188   X: 13876517-13876704 Caenorhabditis elegans
Exon258718   87   X: 13877266-13877352 Caenorhabditis elegans
Exon258730   174   X: 13877409-13877582 Caenorhabditis elegans
Exon258740   79   X: 13880942-13881020 Caenorhabditis elegans
Exon258745   72   X: 13882622-13882693 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T21H8.1h.1 13865095 13882693 -1

1 Sequence

Length
3459

1 Sequence Ontology Term

Identifier Name Description
transcript