WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H8.1s.1 Sequence Name  T21H8.1s.1
Length (nt)  2442   Chromosome Location  X: 13865539-13870674
Chromosome . Primary Identifier  X Chromosome Location . Start  13865539
Chromosome Location . End  13870674 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H8.1s.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011904 hlb-1 T21H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.1s T21H8.1s 2442   X: 13865539-13865577

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1s.1 13865539 13870674 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258508   39   X: 13865539-13865577 Caenorhabditis elegans
Exon258530   111   X: 13865744-13865854 Caenorhabditis elegans
Exon258547   189   X: 13865906-13866094 Caenorhabditis elegans
Exon258564   138   X: 13866400-13866537 Caenorhabditis elegans
Exon258581   707   X: 13866590-13867296 Caenorhabditis elegans
Exon258589   187   X: 13867906-13868092 Caenorhabditis elegans
Exon258615   127   X: 13868147-13868273 Caenorhabditis elegans
Exon258632   314   X: 13868448-13868761 Caenorhabditis elegans
Exon258649   246   X: 13868859-13869104 Caenorhabditis elegans
Exon258662   141   X: 13869748-13869888 Caenorhabditis elegans
Exon258677   114   X: 13870263-13870376 Caenorhabditis elegans
Exon258692   102   X: 13870431-13870532 Caenorhabditis elegans
Exon258694   27   X: 13870648-13870674 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1s.1 13865539 13870674 -1

1 Sequence

Length
2442

1 Sequence Ontology Term

Identifier Name Description
transcript