WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H8.1m.1 Sequence Name  T21H8.1m.1
Length (nt)  2352   Chromosome Location  X: 13865539-13876579
Chromosome . Primary Identifier  X Chromosome Location . Start  13865539
Chromosome Location . End  13876579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H8.1m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011904 hlb-1 T21H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.1m T21H8.1m 2352   X: 13865539-13865577

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1m.1 13865539 13876579 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258510   39   X: 13865539-13865577 Caenorhabditis elegans
Exon258527   111   X: 13865744-13865854 Caenorhabditis elegans
Exon258544   189   X: 13865906-13866094 Caenorhabditis elegans
Exon258561   138   X: 13866400-13866537 Caenorhabditis elegans
Exon258578   707   X: 13866590-13867296 Caenorhabditis elegans
Exon258597   61   X: 13868032-13868092 Caenorhabditis elegans
Exon258612   127   X: 13868147-13868273 Caenorhabditis elegans
Exon258629   314   X: 13868448-13868761 Caenorhabditis elegans
Exon258646   246   X: 13868859-13869104 Caenorhabditis elegans
Exon258659   141   X: 13869748-13869888 Caenorhabditis elegans
Exon258674   114   X: 13870263-13870376 Caenorhabditis elegans
Exon258689   102   X: 13870431-13870532 Caenorhabditis elegans
Exon258708   63   X: 13876517-13876579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1m.1 13865539 13876579 -1

1 Sequence

Length
2352

1 Sequence Ontology Term

Identifier Name Description
transcript