WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33G3.1b.1 Sequence Name  C33G3.1b.1
Length (nt)  3333   Chromosome Location  X: 14049535-14063871
Chromosome . Primary Identifier  X Chromosome Location . Start  14049535
Chromosome Location . End  14063871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33G3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33G3.1b C33G3.1b 2664   X: 14050828-14050944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.1b.1 14049535 14063871 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259040   137   X: 14049535-14049671 Caenorhabditis elegans
Exon259043   130   X: 14050815-14050944 Caenorhabditis elegans
Exon259044   72   X: 14051165-14051236 Caenorhabditis elegans
Exon259046   155   X: 14051773-14051927 Caenorhabditis elegans
Exon259048   109   X: 14051973-14052081 Caenorhabditis elegans
Exon259054   45   X: 14056546-14056590 Caenorhabditis elegans
Exon259057   67   X: 14056760-14056826 Caenorhabditis elegans
Exon259060   146   X: 14057097-14057242 Caenorhabditis elegans
Exon259063   291   X: 14058186-14058476 Caenorhabditis elegans
Exon259066   135   X: 14058592-14058726 Caenorhabditis elegans
Exon259069   153   X: 14059186-14059338 Caenorhabditis elegans
Exon259072   249   X: 14059391-14059639 Caenorhabditis elegans
Exon259075   497   X: 14059780-14060276 Caenorhabditis elegans
Exon259079   220   X: 14060476-14060695 Caenorhabditis elegans
Exon259082   96   X: 14060742-14060837 Caenorhabditis elegans
Exon259085   200   X: 14060973-14061172 Caenorhabditis elegans
Exon259090   631   X: 14063241-14063871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.1b.1 14049535 14063871 1

1 Sequence

Length
3333

1 Sequence Ontology Term

Identifier Name Description
transcript