WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E1.1.1 Sequence Name  R03E1.1.1
Length (nt)  3570   Chromosome Location  X: 14164640-14169619
Chromosome . Primary Identifier  X Chromosome Location . Start  14164640
Chromosome Location . End  14169619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006369 sym-4 R03E1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E1.1 R03E1.1 3132   X: 14165055-14165177

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03E1.1.1 14164640 14169619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259331   538   X: 14164640-14165177 Caenorhabditis elegans
Exon259332   417   X: 14165355-14165771 Caenorhabditis elegans
Exon259333   102   X: 14165910-14166011 Caenorhabditis elegans
Exon259334   817   X: 14166164-14166980 Caenorhabditis elegans
Exon259335   138   X: 14167027-14167164 Caenorhabditis elegans
Exon259336   503   X: 14167221-14167723 Caenorhabditis elegans
Exon259337   540   X: 14167780-14168319 Caenorhabditis elegans
Exon259338   216   X: 14168742-14168957 Caenorhabditis elegans
Exon259339   174   X: 14169222-14169395 Caenorhabditis elegans
Exon259340   125   X: 14169495-14169619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03E1.1.1 14164640 14169619 -1

1 Sequence

Length
3570

1 Sequence Ontology Term

Identifier Name Description
transcript