WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:H01A20.1.1 Sequence Name  H01A20.1.1
Length (nt)  1744   Chromosome Location  X: 14558504-14561432
Chromosome . Primary Identifier  X Chromosome Location . Start  14558504
Chromosome Location . End  14561432 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H01A20.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003602 nhr-3 H01A20.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H01A20.1 H01A20.1 1392   X: 14558506-14558663

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H01A20.1.1 14558504 14561432 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260155   160   X: 14558504-14558663 Caenorhabditis elegans
Exon260156   140   X: 14558714-14558853 Caenorhabditis elegans
Exon260157   410   X: 14558905-14559314 Caenorhabditis elegans
Exon260158   132   X: 14559371-14559502 Caenorhabditis elegans
Exon260159   188   X: 14559553-14559740 Caenorhabditis elegans
Exon260160   262   X: 14560667-14560928 Caenorhabditis elegans
Exon260161   452   X: 14560981-14561432 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H01A20.1.1 14558504 14561432 1

1 Sequence

Length
1744

1 Sequence Ontology Term

Identifier Name Description
transcript