WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H4.2.1 Sequence Name  C44H4.2.1
Length (nt)  2513   Chromosome Location  X: 14577935-14580923
Chromosome . Primary Identifier  X Chromosome Location . Start  14577935
Chromosome Location . End  14580923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002282 let-4 C44H4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H4.2 C44H4.2 2322   X: 14578031-14578402

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44H4.2.1 14577935 14580923 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260181   468   X: 14577935-14578402 Caenorhabditis elegans
Exon260182   108   X: 14578452-14578559 Caenorhabditis elegans
Exon260183   127   X: 14578630-14578756 Caenorhabditis elegans
Exon260184   479   X: 14578815-14579293 Caenorhabditis elegans
Exon260185   378   X: 14579344-14579721 Caenorhabditis elegans
Exon260186   213   X: 14579797-14580009 Caenorhabditis elegans
Exon260187   263   X: 14580081-14580343 Caenorhabditis elegans
Exon260188   204   X: 14580390-14580593 Caenorhabditis elegans
Exon260189   273   X: 14580651-14580923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44H4.2.1 14577935 14580923 1

1 Sequence

Length
2513

1 Sequence Ontology Term

Identifier Name Description
transcript