WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40E10.3.1 Sequence Name  F40E10.3.1
Length (nt)  1409   Chromosome Location  X: 14684877-14688322
Chromosome . Primary Identifier  X Chromosome Location . Start  14684877
Chromosome Location . End  14688322 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40E10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000822 csq-1 F40E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40E10.3 F40E10.3 1254   X: 14684878-14685012

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40E10.3.1 14684877 14688322 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260764   136   X: 14684877-14685012 Caenorhabditis elegans
Exon260765   120   X: 14685961-14686080 Caenorhabditis elegans
Exon260766   85   X: 14686127-14686211 Caenorhabditis elegans
Exon260767   104   X: 14686843-14686946 Caenorhabditis elegans
Exon260768   112   X: 14687000-14687111 Caenorhabditis elegans
Exon260769   74   X: 14687161-14687234 Caenorhabditis elegans
Exon260770   180   X: 14687407-14687586 Caenorhabditis elegans
Exon260772   240   X: 14687634-14687873 Caenorhabditis elegans
Exon260773   127   X: 14687921-14688047 Caenorhabditis elegans
Exon260774   231   X: 14688092-14688322 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40E10.3.1 14684877 14688322 1

1 Sequence

Length
1409

1 Sequence Ontology Term

Identifier Name Description
transcript