WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C12.7.1 Sequence Name  C27C12.7.1
Length (nt)  2557   Chromosome Location  X: 14831831-14838191
Chromosome . Primary Identifier  X Chromosome Location . Start  14831831
Chromosome Location . End  14838191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C12.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001055 dpf-2 C27C12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C12.7 C27C12.7 2490   X: 14831854-14831865

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C27C12.7.1 14831831 14838191 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261115   35   X: 14831831-14831865 Caenorhabditis elegans
Exon261116   139   X: 14831916-14832054 Caenorhabditis elegans
Exon261117   218   X: 14833282-14833499 Caenorhabditis elegans
Exon261118   129   X: 14833555-14833683 Caenorhabditis elegans
Exon261119   65   X: 14833728-14833792 Caenorhabditis elegans
Exon261120   273   X: 14833841-14834113 Caenorhabditis elegans
Exon261121   340   X: 14835221-14835560 Caenorhabditis elegans
Exon261122   327   X: 14835608-14835934 Caenorhabditis elegans
Exon261123   154   X: 14836036-14836189 Caenorhabditis elegans
Exon261124   90   X: 14836232-14836321 Caenorhabditis elegans
Exon261125   70   X: 14836372-14836441 Caenorhabditis elegans
Exon261126   122   X: 14836495-14836616 Caenorhabditis elegans
Exon261127   131   X: 14836666-14836796 Caenorhabditis elegans
Exon261128   103   X: 14836845-14836947 Caenorhabditis elegans
Exon261129   132   X: 14837738-14837869 Caenorhabditis elegans
Exon261130   74   X: 14837915-14837988 Caenorhabditis elegans
Exon261131   155   X: 14838037-14838191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C27C12.7.1 14831831 14838191 1

1 Sequence

Length
2557

1 Sequence Ontology Term

Identifier Name Description
transcript