WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1j.1 Sequence Name  R07D5.1j.1
Length (nt)  1563   Chromosome Location  X: 15121822-15127574
Chromosome . Primary Identifier  X Chromosome Location . Start  15121822
Chromosome Location . End  15127574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1j R07D5.1j 1563   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1j.1 15121822 15127574 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261685   149   X: 15121822-15121970 Caenorhabditis elegans
Exon261699   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261710   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261721   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261732   107   X: 15123420-15123526 Caenorhabditis elegans
Exon261743   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261754   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261765   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261777   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261778   195   X: 15127380-15127574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1j.1 15121822 15127574 -1

1 Sequence

Length
1563

1 Sequence Ontology Term

Identifier Name Description
transcript