WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F2.2a.1 Sequence Name  F46F2.2a.1
Length (nt)  2729   Chromosome Location  X: 15268608-15273789
Chromosome . Primary Identifier  X Chromosome Location . Start  15268608
Chromosome Location . End  15273789 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002203 kin-20 F46F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F2.2a F46F2.2a 1440   X: 15270733-15270748

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F2.2a.1 15268608 15273789 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261991   1119   X: 15268608-15269726 Caenorhabditis elegans
Exon261998   89   X: 15270660-15270748 Caenorhabditis elegans
Exon262007   316   X: 15271227-15271542 Caenorhabditis elegans
Exon262015   124   X: 15272328-15272451 Caenorhabditis elegans
Exon262026   443   X: 15272510-15272952 Caenorhabditis elegans
Exon262033   638   X: 15273152-15273789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F2.2a.1 15268608 15273789 -1

1 Sequence

Length
2729

1 Sequence Ontology Term

Identifier Name Description
transcript