WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F2.2f.1 Sequence Name  F46F2.2f.1
Length (nt)  2097   Chromosome Location  X: 15268638-15272947
Chromosome . Primary Identifier  X Chromosome Location . Start  15268638
Chromosome Location . End  15272947 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F2.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002203 kin-20 F46F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F2.2f F46F2.2f 897   X: 15271105-15271123

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F2.2f.1 15268638 15272947 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261995   1089   X: 15268638-15269726 Caenorhabditis elegans
Exon262001   89   X: 15270660-15270748 Caenorhabditis elegans
Exon262005   41   X: 15271083-15271123 Caenorhabditis elegans
Exon262012   316   X: 15271227-15271542 Caenorhabditis elegans
Exon262020   124   X: 15272328-15272451 Caenorhabditis elegans
Exon262024   438   X: 15272510-15272947 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F2.2f.1 15268638 15272947 -1

1 Sequence

Length
2097

1 Sequence Ontology Term

Identifier Name Description
transcript