WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02D4.2c.1 Sequence Name  C02D4.2c.1
Length (nt)  600   Chromosome Location  X: 15289954-15298223
Chromosome . Primary Identifier  X Chromosome Location . Start  15289954
Chromosome Location . End  15298223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02D4.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004777 ser-2 C02D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02D4.2c C02D4.2c 600   X: 15289954-15290019

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2c.1 15289954 15298223 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262080   66   X: 15289954-15290019 Caenorhabditis elegans
Exon262084   76   X: 15290067-15290142 Caenorhabditis elegans
Exon262091   106   X: 15290202-15290307 Caenorhabditis elegans
Exon262100   166   X: 15290984-15291149 Caenorhabditis elegans
Exon262107   165   X: 15291781-15291945 Caenorhabditis elegans
Exon262121   21   X: 15298203-15298223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2c.1 15289954 15298223 -1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript