WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39D8.3b Sequence Name  F39D8.3b
Length (nt)  1212   Chromosome Location  X: 15421071-15421176
Chromosome . Primary Identifier  X Chromosome Location . Start  15421071
Chromosome Location . End  15421176
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39D8.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47951 F39D8.3, isoform b 46.3 403 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00046771
WBRNAi00014599
WBRNAi00031987

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39D8.3b 15421071 15421176 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009561 F39D8.3 F39D8.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39D8.3b 15421071 15421176 1
CDS:F39D8.3b 15422508 15422628 1
CDS:F39D8.3b 15422678 15422855 1
CDS:F39D8.3b 15422926 15423078 1
CDS:F39D8.3b 15423122 15423261 1
CDS:F39D8.3b 15423308 15423489 1
CDS:F39D8.3b 15424121 15424297 1
CDS:F39D8.3b 15424359 15424481 1
CDS:F39D8.3b 15424776 15424807 1

1 Sequence

Length
1212

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39D8.3b.1 F39D8.3b.1 1212   X: 15421071-15424807