WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H13N06.2.1 Sequence Name  H13N06.2.1
Length (nt)  1604   Chromosome Location  X: 15488106-15491987
Chromosome . Primary Identifier  X Chromosome Location . Start  15488106
Chromosome Location . End  15491987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H13N06.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010396 H13N06.2 H13N06.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H13N06.2 H13N06.2 1365   X: 15488120-15488168

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.2.1 15488106 15491987 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262497   63   X: 15488106-15488168 Caenorhabditis elegans
Exon262498   813   X: 15488873-15489685 Caenorhabditis elegans
Exon262499   113   X: 15489811-15489923 Caenorhabditis elegans
Exon262500   97   X: 15489993-15490089 Caenorhabditis elegans
Exon262501   151   X: 15491109-15491259 Caenorhabditis elegans
Exon262502   54   X: 15491300-15491353 Caenorhabditis elegans
Exon262503   313   X: 15491675-15491987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.2.1 15488106 15491987 1

1 Sequence

Length
1604

1 Sequence Ontology Term

Identifier Name Description
transcript