WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H13N06.3.1 Sequence Name  H13N06.3.1
Length (nt)  1950   Chromosome Location  X: 15493602-15497504
Chromosome . Primary Identifier  X Chromosome Location . Start  15493602
Chromosome Location . End  15497504 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H13N06.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001649 gob-1 H13N06.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H13N06.3 H13N06.3 1320   X: 15493671-15493686

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.3.1 15493602 15497504 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262504   85   X: 15493602-15493686 Caenorhabditis elegans
Exon262505   59   X: 15494438-15494496 Caenorhabditis elegans
Exon262506   93   X: 15494546-15494638 Caenorhabditis elegans
Exon262507   102   X: 15494954-15495055 Caenorhabditis elegans
Exon262508   270   X: 15495106-15495375 Caenorhabditis elegans
Exon262509   487   X: 15495539-15496025 Caenorhabditis elegans
Exon262510   143   X: 15496072-15496214 Caenorhabditis elegans
Exon262511   711   X: 15496794-15497504 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.3.1 15493602 15497504 1

1 Sequence

Length
1950

1 Sequence Ontology Term

Identifier Name Description
transcript