WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G12.2a.2 Sequence Name  F01G12.2a.2
Length (nt)  1586   Chromosome Location  X: 16376588-16380058
Chromosome . Primary Identifier  X Chromosome Location . Start  16376588
Chromosome Location . End  16380058 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G12.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006353 sur-7 F01G12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G12.2a F01G12.2a 693   X: 16378061-16378097

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G12.2a.2 16376588 16380058 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264032   181   X: 16376588-16376768 Caenorhabditis elegans
Exon264037   149   X: 16376814-16376962 Caenorhabditis elegans
Exon264041   149   X: 16377621-16377769 Caenorhabditis elegans
Exon264045   110   X: 16377988-16378097 Caenorhabditis elegans
Exon264049   249   X: 16378231-16378479 Caenorhabditis elegans
Exon264053   170   X: 16378780-16378949 Caenorhabditis elegans
Exon264057   102   X: 16379269-16379370 Caenorhabditis elegans
Exon264063   476   X: 16379583-16380058 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G12.2a.2 16376588 16380058 1

1 Sequence

Length
1586

1 Sequence Ontology Term

Identifier Name Description
transcript