WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05G3.2.1 Sequence Name  K05G3.2.1
Length (nt)  983   Chromosome Location  X: 16494930-16499875
Chromosome . Primary Identifier  X Chromosome Location . Start  16494930
Chromosome Location . End  16499875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05G3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019423 K05G3.2 K05G3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05G3.2 K05G3.2 735   X: 16496654-16496769

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05G3.2.1 16494930 16499875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264275   85   X: 16494930-16495014 Caenorhabditis elegans
Exon264276   41   X: 16496338-16496378 Caenorhabditis elegans
Exon264277   97   X: 16496430-16496526 Caenorhabditis elegans
Exon264278   141   X: 16496629-16496769 Caenorhabditis elegans
Exon264279   38   X: 16497021-16497058 Caenorhabditis elegans
Exon264280   85   X: 16497115-16497199 Caenorhabditis elegans
Exon264281   44   X: 16497313-16497356 Caenorhabditis elegans
Exon264282   106   X: 16497405-16497510 Caenorhabditis elegans
Exon264283   35   X: 16497898-16497932 Caenorhabditis elegans
Exon264284   79   X: 16497983-16498061 Caenorhabditis elegans
Exon264285   47   X: 16499499-16499545 Caenorhabditis elegans
Exon264286   112   X: 16499593-16499704 Caenorhabditis elegans
Exon264287   73   X: 16499803-16499875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05G3.2.1 16494930 16499875 1

1 Sequence

Length
983

1 Sequence Ontology Term

Identifier Name Description
transcript