WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27B1.1 Sequence Name  T27B1.1
Length (nt)  5214   Chromosome Location  X: 16541419-16541457
Chromosome . Primary Identifier  X Chromosome Location . Start  16541419
Chromosome Location . End  16541457
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27B1.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41845 OSM-1 195.7 1737 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00066932
WBRNAi00067527
WBRNAi00115883
WBRNAi00002251
WBRNAi00054271
WBRNAi00019306
WBRNAi00115875

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27B1.1 16541419 16541457 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003883 osm-1 T27B1.1 Caenorhabditis elegans

25 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27B1.1 16541419 16541457 1
CDS:T27B1.1 16541813 16541956 1
CDS:T27B1.1 16542010 16542122 1
CDS:T27B1.1 16542178 16542283 1
CDS:T27B1.1 16542889 16542968 1
CDS:T27B1.1 16543015 16543090 1
CDS:T27B1.1 16543134 16543345 1
CDS:T27B1.1 16543572 16543695 1
CDS:T27B1.1 16543743 16544241 1
CDS:T27B1.1 16544604 16544938 1
CDS:T27B1.1 16544983 16545219 1
CDS:T27B1.1 16545268 16545558 1
CDS:T27B1.1 16546122 16546376 1
CDS:T27B1.1 16546424 16546529 1
CDS:T27B1.1 16546611 16546678 1
CDS:T27B1.1 16546730 16546816 1
CDS:T27B1.1 16546870 16547169 1
CDS:T27B1.1 16547331 16547510 1
CDS:T27B1.1 16547558 16547792 1
CDS:T27B1.1 16548109 16548307 1
CDS:T27B1.1 16548356 16548653 1
CDS:T27B1.1 16548702 16549016 1
CDS:T27B1.1 16549071 16549670 1
CDS:T27B1.1 16550752 16550966 1
CDS:T27B1.1 16551047 16551146 1

1 Sequence

Length
5214

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27B1.1.1 T27B1.1.1 6024   X: 16540674-16551211