WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35B3.3a.1 Sequence Name  F35B3.3a.1
Length (nt)  1194   Chromosome Location  X: 17013462-17017814
Chromosome . Primary Identifier  X Chromosome Location . Start  17013462
Chromosome Location . End  17017814 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35B3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018030 F35B3.3 F35B3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35B3.3a F35B3.3a 1194   X: 17013462-17013511

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35B3.3a.1 17013462 17017814 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265125   50   X: 17013462-17013511 Caenorhabditis elegans
Exon265126   112   X: 17013562-17013673 Caenorhabditis elegans
Exon265127   53   X: 17013747-17013799 Caenorhabditis elegans
Exon265128   115   X: 17013845-17013959 Caenorhabditis elegans
Exon265131   105   X: 17015453-17015557 Caenorhabditis elegans
Exon265133   164   X: 17015604-17015767 Caenorhabditis elegans
Exon265135   103   X: 17015899-17016001 Caenorhabditis elegans
Exon265137   111   X: 17016049-17016159 Caenorhabditis elegans
Exon265139   258   X: 17016694-17016951 Caenorhabditis elegans
Exon265141   123   X: 17017692-17017814 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35B3.3a.1 17013462 17017814 1

1 Sequence

Length
1194

1 Sequence Ontology Term

Identifier Name Description
transcript