WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36E6.2.2 Sequence Name  C36E6.2.2
Length (nt)  1880   Chromosome Location  X: 17451670-17455868
Chromosome . Primary Identifier  X Chromosome Location . Start  17451670
Chromosome Location . End  17455868 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36E6.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016490 C36E6.2 C36E6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36E6.2 C36E6.2 720   X: 17452397-17452459

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36E6.2.2 17451670 17455868 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265994   790   X: 17451670-17452459 Caenorhabditis elegans
Exon265997   86   X: 17452520-17452605 Caenorhabditis elegans
Exon265999   130   X: 17452651-17452780 Caenorhabditis elegans
Exon266001   103   X: 17453248-17453350 Caenorhabditis elegans
Exon266003   150   X: 17453403-17453552 Caenorhabditis elegans
Exon266005   621   X: 17455248-17455868 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36E6.2.2 17451670 17455868 1

1 Sequence

Length
1880

1 Sequence Ontology Term

Identifier Name Description
transcript