WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39B3.2 Sequence Name  F39B3.2
Length (nt)  1245   Chromosome Location  X: 17567984-17568014
Chromosome . Primary Identifier  X Chromosome Location . Start  17567984
Chromosome Location . End  17568014
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39B3.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30978 FRPR-7 47.3 414 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00046762
WBRNAi00046763
WBRNAi00014592
WBRNAi00014593
WBRNAi00031983
WBRNAi00112679

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39B3.2 17567984 17568014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018191 frpr-7 F39B3.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39B3.2 17567984 17568014 -1
CDS:F39B3.2 17568610 17568722 -1
CDS:F39B3.2 17568770 17568976 -1
CDS:F39B3.2 17569030 17569123 -1
CDS:F39B3.2 17569185 17569287 -1
CDS:F39B3.2 17569341 17569443 -1
CDS:F39B3.2 17570396 17570540 -1
CDS:F39B3.2 17570607 17570845 -1
CDS:F39B3.2 17571390 17571469 -1
CDS:F39B3.2 17571778 17571907 -1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39B3.2.1 F39B3.2.1 1782   X: 17567565-17579879
Transcript:F39B3.2.2 F39B3.2.2 1628   X: 17567637-17571943