WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE54005 Name  PTP-3, isoform k
Molecular Weight (kDa)  232.0 Length  2070
Organism  Caenorhabditis elegans MD5 Checksum  97f02d11ad91ec3e2c3ea16901fefe75
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
2070
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1k C09D8.1k 6213   II: 10975539-10975674

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

31 Motifs

WormBase ID
Active_site
INTERPRO:IPR003595
INTERPRO:IPR029021
SMART:SM00404
SMART:SM00194
PFAM:PF00102
SUPERFAMILY:SSF52799
INTERPRO:IPR000242
PFSCAN:PS50055
PRINTS:PR00700
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
INTERPRO:IPR013783
PFSCAN:PS50835
PFSCAN:PS50056
SCANPROSITE:PS00383
PFSCAN:PS50853
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
SMART:SM00060
INTERPRO:IPR036116
INTERPRO:IPR003598
INTERPRO:IPR003599
SMART:SM00409
PFAM:PF07679
INTERPRO:IPR013098
PFAM:PF00041
SMART:SM00408
PRINTS:PR00014
HMMPANTHER:PTHR46957