WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE17578 Name  PTP-1, isoform a
Molecular Weight (kDa)  115.1 Length  1026
Organism  Caenorhabditis elegans MD5 Checksum  857b33350032690ea01232776346eff6
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1026
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D5.2a C48D5.2a 3081   III: 3590770-3590907

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

45 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
INTERPRO:IPR003595
INTERPRO:IPR029021
SMART:SM00404
SMART:SM00194
PFAM:PF00102
SUPERFAMILY:SSF52799
INTERPRO:IPR000242
PFSCAN:PS50055
PRINTS:PR00700
INTERPRO:IPR001478
PFAM:PF00595
SUPERFAMILY:SSF50156
PFSCAN:PS50057
SMART:SM01196
SMART:SM00295
PFAM:PF09380
INTERPRO:IPR036034
SCANPROSITE:PS00661
SCANPROSITE:PS00660
PFAM:PF00373
SUPERFAMILY:SSF47031
INTERPRO:IPR018980
INTERPRO:IPR019749
INTERPRO:IPR035963
PRINTS:PR00935
PFSCAN:PS50056
SCANPROSITE:PS00383