WormMine: CDS CDS:C48D5.2a

• WormMine ID: CDS:C48D5.2a
• Sequence Name: C48D5.2a
• Length (nt): 3081
• Chromosome Location: III: 3590770-3590907
• Chromosome . Primary Identifier: III
• Chromosome Location . Start: 3590770
• Chromosome Location . End: 3590907

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: C48D5.2a

Proteins

1 Protein

WormBase ID	Name	Molecular Weight (kDa)	Length	Organism
CE17578	PTP-1, isoform a	115.1	1026	Caenorhabditis elegans

Other

13 RNAi

WormBase ID
WBRNAi00002118
WBRNAi00042735
WBRNAi00114837
WBRNAi00012103
WBRNAi00005988
WBRNAi00109611
WBRNAi00029944
WBRNAi00077327
WBRNAi00109223
WBRNAi00092936
WBRNAi00109320
WBRNAi00109514
WBRNAi00109417

1 Chromosome

• WormBase ID: III
• Organism: Caenorhabditis elegans
• Length (nt): 13783801

1 Chromosome Location

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3590770
• End: 3590907
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans CDS sequence (Fasta)

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00004213	ptp-1	C48D5.2	Caenorhabditis elegans

17 Locations

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3590770
• End: 3590907
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3591624
• End: 3591740
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3591785
• End: 3592001
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3592397
• End: 3592523
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3592604
• End: 3592850
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3593165
• End: 3593391
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3594210
• End: 3594323
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3594440
• End: 3594592
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3604815
• End: 3604917
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3607049
• End: 3607232
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3607558
• End: 3607745
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3608124
• End: 3608424
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3608994
• End: 3609222
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3609685
• End: 3609772
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3609824
• End: 3610099
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3610561
• End: 3610845
• Strand: 1

• Feature . Primary Identifier: CDS:C48D5.2a
• Start: 3611478
• End: 3611564
• Strand: 1

1 Sequence

• Length: 3081

1 Sequence Ontology Term

• Name: CDS

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C48D5.2a.1	C48D5.2a.1	3536	III: 3590722-3611971