WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE39724 Name  RHGF-1
Molecular Weight (kDa)  151.3 Length  1340
Organism  Caenorhabditis elegans MD5 Checksum  c3bf92ca415bf504420f467c3b9bdf5a
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1340
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13E6.6 F13E6.6 4023   X: 10698178-10698303

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

32 Motifs

WormBase ID
PFSCAN:PS50003
SMART:SM00233
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFSCAN:PS50010
PFSCAN:PS50081
SMART:SM00325
SMART:SM00109
SCANPROSITE:PS00479
INTERPRO:IPR046349
INTERPRO:IPR036305
SUPERFAMILY:SSF48065
INTERPRO:IPR044926
SUPERFAMILY:SSF57889
SUPERFAMILY:SSF48097
PFAM:PF00130
PFAM:PF00621
INTERPRO:IPR002219
INTERPRO:IPR035899
INTERPRO:IPR000219
HMMPANTHER:PTHR45872
PFAM:PF17838
PFAM:PF09128
INTERPRO:IPR041020
INTERPRO:IPR015212
INTERPRO:IPR001478
PFAM:PF00595
SUPERFAMILY:SSF50156
INTERPRO:IPR036034