WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE42678 Name  PLC-1, isoform e
Molecular Weight (kDa)  210.4 Length  1878
Organism  Caenorhabditis elegans MD5 Checksum  c63ba168bdc038519da18ecfdb48baf3
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1878
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1e F31B12.1e 5637   X: 10796447-10796655

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

37 Motifs

WormBase ID
INTERPRO:IPR023578
INTERPRO:IPR036964
INTERPRO:IPR001895
PFSCAN:PS50009
SMART:SM00147
PFAM:PF00617
SUPERFAMILY:SSF48366
PFSCAN:PS50004
INTERPRO:IPR000008
INTERPRO:IPR035892
SMART:SM00239
PFAM:PF00168
SUPERFAMILY:SSF49562
SUPERFAMILY:SSF47473
INTERPRO:IPR011992
SUPERFAMILY:SSF54236
INTERPRO:IPR029071
SUPERFAMILY:SSF51695
INTERPRO:IPR017946
INTERPRO:IPR000909
INTERPRO:IPR001192
INTERPRO:IPR001711
HMMPANTHER:PTHR10336
PFSCAN:PS50008
PFSCAN:PS50007
PFAM:PF00388
PFAM:PF00387
PRINTS:PR00390
SMART:SM00149
SMART:SM00148