WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE03335 Name  DEP-1, isoform a
Molecular Weight (kDa)  152.9 Length  1367
Organism  Caenorhabditis elegans MD5 Checksum  4e9c16aa8f1cf5138a8f302adaa7353b
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1367
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44G4.8a F44G4.8a 4104   II: 9006171-9006311

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

23 Motifs

WormBase ID
Active_site
INTERPRO:IPR003595
INTERPRO:IPR029021
SMART:SM00404
SMART:SM00194
PFAM:PF00102
SUPERFAMILY:SSF52799
INTERPRO:IPR000242
PFSCAN:PS50055
PRINTS:PR00700
INTERPRO:IPR013783
PFSCAN:PS50056
SCANPROSITE:PS00383
PFSCAN:PS50853
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
SMART:SM00060
INTERPRO:IPR036116
PFAM:PF00041
HMMPANTHER:PTHR46957
INTERPRO:IPR050713
PFAM:PF18861
INTERPRO:IPR041201