WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE49945 Name  EPI-1, isoform f
Molecular Weight (kDa)  409.2 Length  3715
Organism  Caenorhabditis elegans MD5 Checksum  2f54ef799f52fd54b8ab621a73248f03
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
3715
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3f K08C7.3f 11148   IV: 10666833-10667028

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

30 Motifs

WormBase ID
SMART:SM00181
INTERPRO:IPR000742
SUPERFAMILY:SSF57196
PFAM:PF02210
PFSCAN:PS50025
SMART:SM00282
SUPERFAMILY:SSF49899
INTERPRO:IPR013320
INTERPRO:IPR001791
SUPERFAMILY:SSF49785
INTERPRO:IPR008979
SCANPROSITE:PS00022
HMMPANTHER:PTHR10574
SMART:SM00180
PFAM:PF00053
PFAM:PF00055
SMART:SM00136
INTERPRO:IPR002049
PFSCAN:PS50027
PFSCAN:PS51117
PRINTS:PR00011
SCANPROSITE:PS01248
INTERPRO:IPR008211
SMART:SM00281
PFAM:PF00052
PFSCAN:PS51115
INTERPRO:IPR000034
PFAM:PF06009
INTERPRO:IPR050440
INTERPRO:IPR010307