WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The random variance model (RVM)t-test was applied toidentify differentially expressed mRNAs and miRNAsbetween the SiNPs-treated group and the control group. P-value <0.05 and fold change (FC) >1.5 were considered as the threshold screening between the SiNP-treated groupand the control group. Description  Transcripts that showed significantly increased expression in animals after 24 hour exposure to 100ug per ml silica nanoparticles (SiNPs).
Primary Identifier  WBPaper00060100:SiNP_upregulated_mRNA

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
WBGene00000027 abu-4 Y5H2A.3 Caenorhabditis elegans
WBGene00000029 abu-6 C03A7.7 Caenorhabditis elegans
WBGene00000030 abu-7 C03A7.8 Caenorhabditis elegans
WBGene00000031 abu-8 C03A7.14 Caenorhabditis elegans
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
WBGene00000066 act-4 M03F4.2 Caenorhabditis elegans
WBGene00000067 act-5 T25C8.2 Caenorhabditis elegans
WBGene00000074 adm-2 C04A11.4 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000105 alg-1 F48F7.1 Caenorhabditis elegans
WBGene00000106 alg-2 T07D3.7 Caenorhabditis elegans
WBGene00000123 ama-1 F36A4.7 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans
WBGene00000184 arf-6 Y116A8C.12 Caenorhabditis elegans
WBGene00000186 ark-1 C01C7.1 Caenorhabditis elegans
WBGene00000227 atm-1 Y48G1BL.2 Caenorhabditis elegans
WBGene00000231 atx-2 D2045.1 Caenorhabditis elegans
WBGene00000284 cah-6 T28F2.3 Caenorhabditis elegans
WBGene00000294 cas-1 F41G4.2 Caenorhabditis elegans
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
WBGene00000368 ccb-1 T28F2.5 Caenorhabditis elegans
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans
WBGene00000387 cdc-25.2 F16B4.8 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
silicon dioxide nanoparticle WBMol:00007893