WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CBP38468 Name  Cbr-VAV-1, isoform b
Molecular Weight (kDa)  108.6 Length  950
Organism  Caenorhabditis briggsae MD5 Checksum  444ede07501cdfa73e232e485c33ed33
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

Proteins

1 Sequence

Length
950
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16186b CBG16186b   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. briggsae protein sequence (Fasta)  

41 Motifs

WormBase ID
PFSCAN:PS50003
SMART:SM00233
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFAM:PF00169
PFSCAN:PS50010
PFSCAN:PS50081
SMART:SM00325
SMART:SM00109
SUPERFAMILY:SSF48065
SUPERFAMILY:SSF57889
PFAM:PF00130
PFAM:PF00621
INTERPRO:IPR002219
INTERPRO:IPR035899
INTERPRO:IPR000219
PFSCAN:PS50002
INTERPRO:IPR036028
SMART:SM00326
SUPERFAMILY:SSF50044
INTERPRO:IPR001452
PFAM:PF07653
PFSCAN:PS50021
INTERPRO:IPR036872
SMART:SM00033
PFAM:PF00307
INTERPRO:IPR001715
SUPERFAMILY:SSF47576
PFSCAN:PS50001