WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expression is seen from late embryo to adulthood. It is seen in the following components-- the pharyngeal musculature, anal depressor muscle and anal sphincter, and diffuse expression along the length of the tail spike. Also observed is diffuse expression around the anterior portion of the pharynx, which is probably bodywall muscle. Primary Identifier  Expr2030
Remark  Other strain-- UL960

10 Anatomy Terms

Definition Name Synonym Primary Identifier
type of cells that make up muscle layers in the pharynx. pharyngeal muscle cell   WBbt:0005451
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
a single, H-shaped cell which lies just above the anus and connects the roof of the anal canal to the dorsal bodywall; its contractions act to increase the size of the anal opening by lifting the roof of the rectum and hence facilitate expulsion of intestinal contents. anal depressor muscle dilator muscle WBbt:0004292
a saddle-shaped muscle cell that encircles the intestinal-rectal valve anal sphincter muscle lineage name: ABprpppppap WBbt:0005798
Tail ventral hypodermis, 9th hypodermis cell hyp9   WBbt:0004380
Tail ventral hypodermis hyp10 lineage name: ABplppppppp WBbt:0004378
Tail ventral hypodermis, 8th hypodermis cell hyp8   WBbt:0004381
Tail dorsal hypodermis hyp11 lineage name: Cpappv WBbt:0004377
Intestino-rectal valve virL lineage name: ABprpappppp WBbt:0004511
Intestino-rectal valve virR lineage name: ABprpappppa WBbt:0004510

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011154 R09A8.5 R09A8.5 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003