WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Weak expression, gut, spermatheca, 2-6 head neurons. pharynx: muscle and marginal cells, pharyngo-intestinal valve, gut: weak expression in mainly anterior-most and posterior-most cells, some arcade cells, rectal gland cells, occasionally very weak expression in hyp (adults), 2 pairs of interneurons axons projecting into ventral nerve cord, 1 pair very weak, no longer visible in older animals Primary Identifier  Expr11304

10 Anatomy Terms

Definition Name Synonym Primary Identifier
an accordion-like tube that contains sperm and is the site of oocyte fertilization. spermatheca   WBbt:0005319
A group of six equivalent cells forms a tightly constructed `valve` that links the posterior bulb of the pharynx to the anterior four cells of the intestine. These six cells comprise a small epithelial channel with a cuticular lining in continuity with the pharyngeal cuticle and link the lumen of the pharynx to the large lumen of the anterior intestine. pharyngeal-intestinal valve cardia WBbt:0005767
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
type of cells that make up muscle layers in the pharynx. pharyngeal muscle cell   WBbt:0005451
Epidermal layer. hypodermis epidermis WBbt:0005733
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
Interfacial (hypodermal) cells which connect the hypodermal epithelium of the lips to the pharyngeal epithelium, firmly binding the inner tissue (the pharynx) to the outer bodywall (the hypodermis). arcade cell   WBbt:0005793
  rectal gland cell   WBbt:0005799
a type of pharyngeal cell that connects basement membrane to the apices of triangle-shaped pharyngeal lumen. marginal cell   WBbt:0003673
  interneuron   WBbt:0005113

2 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009594 cyld-1 F40F12.5 Caenorhabditis elegans
WBGene00017328 nemp-1 F10C5.2 Caenorhabditis elegans

0 Life Stages