WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expressed in motor neurons in head and ventral nerve cord; sensory neurons and sensory interneurons around nerve ring and tail; pharyngeal-intestinal valve, intestinal-rectal valve, and intestine; in m3 and m4. Expressed in all stages embryo through adult. Primary Identifier  Expr511
Remark  Construct contained 2375 bp upstream of the dyn-1 ATG and 214 amino acids of DYN-1. Transgenic Marker: rol-6(su1006). Construct rescued dyn-1(ky51) uncoordinated and low-fertility phenotypes.

9 Anatomy Terms

Definition Name Synonym Primary Identifier
A group of six equivalent cells forms a tightly constructed `valve` that links the posterior bulb of the pharynx to the anterior four cells of the intestine. These six cells comprise a small epithelial channel with a cuticular lining in continuity with the pharyngeal cuticle and link the lumen of the pharynx to the large lumen of the anterior intestine. pharyngeal-intestinal valve cardia WBbt:0005767
the most extensive region of neuropil in the animal, consists of a large toroidal bundle of processes. nerve ring circumpharyngeal nerve ring WBbt:0006749
neuron making synapse on an effector (muscle, gland). motor neuron motoneuron WBbt:0005409
Intestino-rectal valve virL lineage name: ABprpappppp WBbt:0004511
Intestino-rectal valve virR lineage name: ABprpappppa WBbt:0004510
neuron that senses external stimuli and transduce them to signals internal to the organism. sensory neuron   WBbt:0005759
third pharyngeal muscle cell layer pm3 M3 WBbt:0003740
fourth pharyngeal muscle cell layer pm4 M4 WBbt:0003739
  interneuron   WBbt:0005113

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001130 dyn-1 C02C6.1 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003