WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  GFP expression in animals transgenic for pCJ3 was first observed around the 2-fold stage of embryogenesis and continued throughout development and in the adult worm. The pattern of GFP fluorescence was consistent with expression in all ciliated sensory neurons including the amphids, phasmids, and inner and outer labials. GFP expression was also observed in the sensory rays of the male tail. Primary Identifier  Expr855
Subcellular Localization  Expressed in the transitional zone and cilia of sensory neurons.
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45 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron of phasmid sensillum phasmid neuron   WBbt:0006753
neuron of the amphid sensillum amphid neuron amphid sensory neuron WBbt:0005394
Post-embryonic cell of pedigree V6L.pppapaaa, male sensory rays, neuron, striated rootlet. R4AL lineage name: V6L.pppapaaa WBbt:0004030
Post-embryonic cell of pedigree V6R.pppapaaa, male sensory rays, neuron, striated rootlet. R4AR lineage name: V6R.pppapaaa WBbt:0004029
Post-embryonic cell of pedigree V6L.papapaaa, male sensory rays, neuron, striated rootlet. R2AL lineage name: R2L.aaa WBbt:0004042
Post-embryonic cell of pedigree V6R.papapaaa, male sensory rays, neuron, striated rootlet. R2AR lineage name: R2R.aaa WBbt:0004041
Lateral outer labial neurons OLLL lineage name: ABalppppapaa WBbt:0004445
Lateral outer labial neurons OLLR lineage name: ABpraaapapaa WBbt:0004444
neuron type, member of a set of 12 neurons of the inner labial sensilla. inner labial neuron IL neuron WBbt:0005117
Post-embryonic cell of pedigree V5L.pppppapa, male sensory rays, neuron, darkly staining tip, open to outside. R1BL lineage name: V5L.pppppapa WBbt:0004048
Post-embryonic cell of pedigree TL.apappapa, male sensory rays, neuron, darkly staining tip, open to outside. R7BL lineage name: TL.apappapa WBbt:0004001
Post-embryonic cell of pedigree TL.appapapa, male sensory rays, neuron, darkly staining tip, open to outside. R9BL lineage name: TL.appapapa WBbt:0003968
Male sensory rays, neuron, darkly staining tip, open to outside R9BR lineage name: TR.appapapa WBbt:0003966
Male sensory rays, neuron, darkly staining tip, open to outside R7BR lineage name: TR.apappapa WBbt:0004000
Male sensory rays, neuron, darkly staining tip, open to outside R8BR lineage name: TR.appaaapa WBbt:0003988
Post-embryonic cell of pedigree V6L.ppppaapa, male sensory rays, neuron, darkly staining tip, open to outside. R5BL lineage name: V6L.ppppaapa WBbt:0004022
Post-embryonic cell of pedigree V6R.ppppaapa, male sensory rays, neuron, darkly staining tip, open to outside. R5BR lineage name: V6R.ppppaapa WBbt:0004021
Post-embryonic cell of pedigree V6L.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BL lineage name: V6L.papppapa WBbt:0004034
Post-embryonic cell of pedigree V6R.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BR lineage name: V6R.papppapa WBbt:0004033
Post-embryonic cell of pedigree TL.appaaapa, male sensory rays, neuron, darkly staining tip, open to outside. R8BL lineage name: TL.appaaapa WBbt:0003990
Post-embryonic cell of pedigree V6R.pppapapa, male sensory rays, neuron, darkly staining tip, open to outside. R4BR lineage name: V6R.pppapapa WBbt:0004027
Post-embryonic cell of pedigree V6R.papapapa, male sensory rays, neuron, darkly staining tip, open to outside. R2BR lineage name: V6R.papapapa WBbt:0004039
Post-embryonic cell of pedigree V6L.pppapapa, male sensory rays, neuron, darkly staining tip, open to outside. R4BL lineage name: V6L.pppapapa WBbt:0004028
Post-embryonic cell of pedigree V5R.pppppapa, male sensory rays, neuron, darkly staining tip, open to outside. R1BR lineage name: V5R.pppppapa WBbt:0004046
Post-embryonic cell of pedigree V6L.papapapa, male sensory rays, neuron, darkly staining tip, open to outside. R2BL lineage name: V6L.papapapa WBbt:0004040
Quadrant outer labial neuron OLQDR lineage name: ABalapppapaa WBbt:0004438
Quadrant outer labial neuron OLQVL lineage name: ABplpaaappaa WBbt:0004437
Quadrant outer labial neuron OLQVR lineage name: ABprpaaappaa WBbt:0004431
Quadrant outer labial neuron OLQDL lineage name: ABalapapapaa WBbt:0004439
Post-embryonic cell of pedigree V6R.pppppapa, male sensory rays, neuron, not darkly staining nor open to outside. R6BR lineage name: V6R.pppppapa WBbt:0004012

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003885 osm-5 Y41G9A.1 Caenorhabditis elegans

8 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021
  The C. elegans life stage spanning 460-520min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and double fold. A stage between 1.5-fold embryo and 3-fold embryo. 2-fold embryo Ce WBls:0000019
  The C. elegans life stage spanning 520-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and tripple fold. A stage between 2-fold embryo and fully-elongated embryo. Also called pretzel embryo or pretzel stage. 3-fold embryo Ce WBls:0000020