WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  rnt-1::GFP is visibly expressed in the nuclei of seam cells in embryos from around 260 minutes post fertilisation, just after the time at which seam cell are formed. Seam cell expression in both males and hermaphrodites is visible during all developmental stages, but is particularly strong until late L2. In males, rnt-1::GFP is expressed additionally in seam cell derived ray precursor cells and ray sublineages. rnt-1::GFP is also expressed transiently in body wall muscle nuclei from late embryogenesis until the end of L2. rnt-1::GFP expression was not observed in any other cell types. Expression of rnt-1 has been previously reported in intestinal cells, but no intestinal expression was found using this rescuing GFP reporter construct. Primary Identifier  Expr3752
Remark  Cell_group: ray precursor cells and ray sublineages. This rescuing GFP reporter contains the endogenous rnt-1 3'UTR that was absent from the reporter described by Nam et al (see Expr1819). It is possible that this difference in reporters accounts for the slight difference in the rnt-1 expression pattern observed. Subcellular Localization  Expressed in nuclei.
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27 Anatomy Terms

Definition Name Synonym Primary Identifier
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail seam cell lateral hypodermis WBbt:0005753
Precursor of cells that form male sensory ray 9. R9   WBbt:0006940
Precursor of cells that form male sensory ray 8. R8   WBbt:0006939
Precursor of cells that form male sensory ray 7. R7   WBbt:0006938
Precursor of cells that form male sensory ray 6. R6   WBbt:0006937
Precursor of cells that form male sensory ray 1. R1   WBbt:0006932
Precursor of cells that form male sensory ray 5. R5   WBbt:0006936
Precursor of cells that form male sensory ray 4. R4   WBbt:0006935
Precursor of cells that form male sensory ray 3. R3   WBbt:0006934
Precursor of cells that form male sensory ray 2. R2   WBbt:0006933
Seam hypodermal cell H0R lineage name: ABarpapppa WBbt:0004777
Seam hypodermal cell, postembryonic blast cell H1L lineage name: ABplaaappp WBbt:0004766
Seam hypodermal cell, postembryonic blast cell H1R lineage name: ABarpapppp WBbt:0004765
Seam hyopdermal cell, postemb. blast cell, L1 deirid socket H2L lineage name: ABarppaaap WBbt:0004764
Seam hyopdermal cell, postemb. blast cell, L1 deirid socket H2R lineage name: ABarpppaap WBbt:0004763
Seam hypodermal cell H0L lineage name: ABplaaappa WBbt:0004778
Seam hypodermal cell, postembryonic blast cell V1L lineage name: ABarppapaa WBbt:0004905
Seam hypodermal cell, postembryonic blast cell V6R lineage name: ABarpppppp WBbt:0004874
Seam hypodermal cell, postembryonic blast cell V3R lineage name: ABprappapa WBbt:0004896
Seam hypodermal cell, postembryonic blast cell V4L lineage name: ABarppappa WBbt:0004894
Seam hypodermal cell, postembryonic blast cell V4R lineage name: ABarpppppa WBbt:0004892
Seam hypodermal cell, postembryonic blast cell V5L lineage name: ABplapapaap WBbt:0004890
Seam hypodermal cell, postembryonic blast cell V1R lineage name: ABarppppaa WBbt:0004904
Seam hypodermal cell, postembryonic blast cell V2L lineage name: ABarppapap WBbt:0004902
Seam hypodermal cell, postembryonic blast cell V2R lineage name: ABarppppap WBbt:0004900
Seam hypodermal cell, postembryonic blast cell V3L lineage name: ABplappapa WBbt:0004898

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004393 rnt-1 B0414.2 Caenorhabditis elegans

0 Life Stages