WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  We examined a GRH-1:: GFP::3xFLAG fusion protein expressed from the endogenous grh-1 locus. We observed the first detectable signal in elongating embryos, that is, at the time when oscillatory gene expression initiates (Meeuse et al, 2020). In larvae, GFP signal accumulated in various cell types, including seam cells, vulva precursor cells, non-seam hypodermal cells, pharyngeal cells, and head neurons. Finally, in adults, which lack oscillatory gene expression (Meeuse et al, 2020), GFP levels were diminished or altogether absent in various tissues. Primary Identifier  Expr16391

5 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail seam cell lateral hypodermis WBbt:0005753
  pharyngeal cell   WBbt:0005460
cell that has the potential to form structural part of a vulva. vulval precursor cell VPC WBbt:0007809
primary cell type that forms the hypodermis. hypodermal cell   WBbt:0007846

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001707 grh-1 Y48G8AR.1 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023
  The C. elegans life stage spanning 350-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The stage that embryo starts elongation until elongation is over. elongating embryo Ce WBls:0000015