WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Primary Identifier  Expr2582 Subcellular Localization  The OMA-1::GFP fluorescence in the developing oocytes and one-cell embryos recapitulated the wild-type spatial and temporal patterns of OMA-1 antibody staining. The punctate staining appeared more pronounced and resembled the characteristic pattern of germline P granules. Starting with the onset of the first mitotic division, the intensity of OMA-1-GFP fluorescence rapidly decreased, and by the time the division was complete, only approximately 10% remained. Interestingly, that remaining 10% of the GFP signal in the two-cell embryo was predominantly found in the germline precursor, P1, associated with what appeared to be P granules. The GFP signal continued to decrease in two-cell embryos and again was asymmetric after the next division, with most of the remaining fluorescence segregated to P2, where it was also predominantly associated with granules. The OMA-1-GFP signal became too weak to detect in the embryo after the four-cell stage.

7 Anatomy Terms

Definition Name Synonym Primary Identifier
Single cell zygote P0 lineage name: Z WBbt:0004422
embryonic cell ABa   WBbt:0005906
embryonic cell ABp   WBbt:0005994
Embryonic founder cell AB AB blastomere WBbt:0004015
embryonic cell EMS   WBbt:0006876
embryonic founder cell Psub1 lineage name: P0.p WBbt:0006874
embryonic founder cell Psub2 lineage name: P0.pp WBbt:0006873

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003864 oma-1 C09G9.6 Caenorhabditis elegans

3 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The C. elegans life stage spanning 0-20min after first cleavage at 20 Centigrade. Contains 2 cells. 2-cell embryo Ce WBls:0000007
  Also called zygote. -50min till 0min of first cleavage at 20 Centigrade. Contains 1 cell. 1-cell embryo Ce WBls:0000006
  The C. elegans life stage spanning 20-40min after first cleavage at 20 Centigrade. Contains 4 cells. 4-cell embryo Ce WBls:0000008