WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  ref-1 is expressed in specific subsets of E lineage cells and in other cells in the embryo. We found strong reporter expression in Eal and Epl cells but also weak reporter expression in both right daughters of Ex cells, with the level of expression correlated with the proximity of the cells to the MSapp cells. In wild type embryos Epl is further from the MSapp cell than Eal, and has a significantly lower level of ref-1 reporter expression (p-value = 6.2e-5). In addition Ear and Epr are yet more distant from MSapp and have still lower expression. Plotting ref-1 reporter expression versus distance from MSapp produces a high negative correlation. Primary Identifier  Expr9691

2 Anatomy Terms

Definition Name Synonym Primary Identifier
A cell that is the E blast cell or is a lineal descendant of E. E lineage cell   WBbt:0005208
cell that exists in and is part of an embryo. embryonic cell   WBbt:0007028

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004334 ref-1 T01E8.2 Caenorhabditis elegans

0 Life Stages