WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  pud-1 is expressed strongly and uniformly in the intestine, and less strongly in the hypodermis. Expression starts before the comma stage in many cells, although the gut cells have the strongest signal. Primary Identifier  Expr11080
Remark  pud-1.2 is a perfect duplicate of pud-1.1 (Fig. S4). Subcellular Localization  At the subcellular level, pud-1 was found distributed diffusely in the cytoplasm and the nucleoplasm, and largely excluded from the nucleolus except for one or more nucleolar puncta. The GFP fusion protein was seen in fibrous organelles, the hypodermal hemidesmosome structures that fasten muscles to the cuticle.

2 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Epidermal layer. hypodermis epidermis WBbt:0005733

2 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021236 pud-1.2 Y19D10B.7 Caenorhabditis elegans
WBGene00017499 pud-1.1 F15E11.13 Caenorhabditis elegans

4 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023
  The C. elegans life stage spanning 350-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The stage that embryo starts elongation until elongation is over. elongating embryo Ce WBls:0000015