WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  daf-36::gfp was most strikingly expressed in the intestinal cytoplasm at all postembryonic stages, including dauer. In addition, daf-36::gfp was seen in the head mesodermal cell. Occasionally, very faint expression was seen within two unidentified head neurons, posterior to the nerve ring, which were clearly distinct from the XXXR/L. During the L2d stage, prior to entry into dauer diapause, neuronal expression increased slightly, and, surprisingly, expression commenced in the seam cells, epidermal cells located at the lateral midline. Primary Identifier  Expr3866
Subcellular Localization  Expressed in cytoplasm. Visible also in daf-2, daf-7, and daf-11 Daf-c dauers as well as in normal dauers, epidermal daf-36::gfp appeared to be localized in a cytosolic meshwork.

4 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses. neuron neurone WBbt:0003679
a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail seam cell lateral hypodermis WBbt:0005753
Head mesodermal cell, function unknown head mesodermal cell hmc WBbt:0004697

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007536 daf-36 C12D8.5 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  A third stage larva specialized for dispersal and long term survival. dauer larva Ce WBls:0000032