WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  SEL-8::GFP appears to accumulate in most, if not all, nuclei of embryos before morphogenesis. In larvae, SEL-8::GFP is visible throughout development in head, tail, and ventral cord neurons. In addition, there is a dynamic and complex expression pattern in other tissues. In the somatic gonad, SEL-8::GFP is expressed in Z1.ppp and Z4.aaa during the L2 stage, at the time that these cells are deciding between the anchor cell and ventral uterine precursor cell fates. SEL-8::GFP is also visible, albeit faintly, in the vulval precursor cells in the L3 stage, the time at which they undergo a LIN-12-mediated cell fate decision, and is expressed in a dynamic pattern during the vulval cell lineages. Primary Identifier  Expr1109
Subcellular Localization  In all cells where fluorescence is visible, SEL-8::GFP is nuclear.
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42 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
neuron with its cell body situated in the tail, posterior to rectum. tail neuron   WBbt:0006759
descendent cell of post-embryonic blast cell P5, posterior, in hermaphrodite. P5.p hermaphrodite   WBbt:0008121
descendent cell of post-embryonic blast cell P4, posterior, in hermaphrodite. P4.p hermaphrodite   WBbt:0008117
descendent cell of post-embryonic blast cell P3, posterior in hermaphrodite. P3.p hermaphrodite   WBbt:0008112
  P8.p hermaphrodite   WBbt:0008133
  P7.p hermaphrodite   WBbt:0008129
  P6.p hermaphrodite   WBbt:0008125
adult vulval toroid cell, F, formed by fusion of precursors of lineage names P6.papl, P6.papr, P6.ppal and P6.ppar. vulF   WBbt:0006768
adult vulval toroid cell, E, formed by fusion of precursors of lineage names P6.paal, P6.paar, P6.pppl and P6.pppr. vulE   WBbt:0006767
Posterior daughter cell of P8.p, fuses into postembryonic large hypodermal syncytium in hermaphrodite. P8.pp lineage name: P8.pp WBbt:0004145
Posterior daughter cell of P3.p, fuses into postembryonic large hypodermal syncytium in hermaphrodite. P3.pp lineage name: P3.pp WBbt:0004153
Anterior daughter cell of P4.p, fuses into postembryonic large hypodermal syncytium in hermaphrodite. P4.pa lineage name: P4.pa WBbt:0004151
Posterior daughter cell of P4.p, fuses into postembryonic large hypodermal syncytium in hermaphrodite. P4.pp lineage name: P4.pp WBbt:0004149
Anterior daughter cell of P8.p, fuses into postembryonic large hypodermal syncytium in hermaphrodite. P8.pa lineage name: P8.pa WBbt:0004147
Posterior daughter cell of P5.pp, fuses into hermaphrodite vulD syncytium. P5.ppp lineage name: P5.ppp WBbt:0004477
Anterior daughter cell of P7.pa, fuses into hermaphrodite vulD syncytium. P7.paa lineage name: P7.paa WBbt:0004448
Anterior daughter cell of P3.p, fuses into postembryonic large hypodermal syncytium in hermaphrodite. P3.pa lineage name: P3.pa WBbt:0004155
cell, anterior daughter of P6.p P6.pa   WBbt:0006987
cell, posterior descendent of P7.p P7.pp   WBbt:0006984
cell, anterior descendent of P7.p P7.pa   WBbt:0006983
cell, anterior daughter of P6.pp P6.ppa   WBbt:0006991
cell, posterior daughter of P6.pa P6.pap   WBbt:0006990
cell, anterior daughter of P6.pa P6.paa   WBbt:0006989
cell, posteior daughter of P6.p P6.pp   WBbt:0006988
post-embryonic cell of pedigree P5.pp P5.pp   WBbt:0007255
post-embryonic cell of pedigree P5.pap P5.pap   WBbt:0007254
post-embryonic cell of pedigree P5.paa P5.paa   WBbt:0007253
post-embryonic cell of pedigree P5.pa P5.pa   WBbt:0007252

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004765 sel-8 C32A3.1 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023