WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Life Stage :

Definition  At 20 Centigrade: 4-7 days after L4-adult molt. 7-10 days after first cleavage. Primary Identifier  WBls:0000069
Public Name  4-7 days post-L4 adult hermaphrodite Ce

0 Anatomy Terms

2 Contained In

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057
  A C. elegans life stage that occurs during the adult life stage C. elegans life stage occurring during adulthood WBls:0000816

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes with dynamic regulation pattern in signaling pathways during aging, based on re-analysis of microarray datasets. The approaches of Gene Set Enrichment Analysis (GSEA) were performed using Category package in version 2.6.0 of Bioconductor to identify the significantly enriched pathways and genes in both above two subsets. In this analysis, the gene sets with less than 10 genes were excluded. The t-statistic mean of the genes was computed in each KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway. Using a permutation test with 1000 times, the cutoff of significance level p value was set as 0.01 for the most significant pathways related to aging. Accordingly, the significant pathways and genes were then identified under the comparison between different time points, including from L4 to D6 and from D6 to D15. WBPaper00045140:aging_dynamic_regulation

4 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr13553 SET-18::GFP was specifically distributed in pharyngeal and body wall muscles. Muscle-specific expression of SET-18::GFP was gradually increased from day 3 to day 11.  
Reporter gene fusion type not specified.   Expr3844 LIN-14::GFP in the lin-14(n179ts); maEx166 strain continues to be expressed in cells of the head (until days 18) and tail (until days 16) of the aging adult.  
    Expr11969 mir-228::GFP expression increases during early adulthood, reaches a peak, and then begins to slowly decrease in mid to late adulthood.  
    Expr3845 lin-4::GFP in the zaIs1 strain continues to be widely expressed in the aging adult.  

1 Followed By

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 7-10 days after L4-adult molt. 10-13 days after first cleavage. 7-10 days post-L4 adult hermaphrodite Ce WBls:0000070

1 Preceded By

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068

0 Sub Stages