WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of two neurons with ciliated endings in the posterior deirid sensilla. Name  PDE
Primary Identifier  WBbt:0006747 Synonym  postdeirid neuron
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2 Children

Definition Name Synonym Primary Identifier
Neuron, dopaminergic of postderid sensillum PDEL lineage name: V5L.paaa WBbt:0004383
Neuron, dopaminergic of postderid sensillum PDER lineage name: V5R.paaa WBbt:0004382

34 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Top 300 transcripts enriched in ADE, AQR, BAG, CEP, FLP, IL1 neuron, IL2 neuron, OLL, OLQ, PDE, PHA, PHB, PQR, PVR according to single cell RNAseq. Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. WBPaper00061340:Ciliated_non_amphid_neuron
  Single-cell RNA-Seq cell group 96 expressed in: AIN. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:96
  Single-cell RNA-Seq cell group 111 expressed in: AWC. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:111
  Single-cell RNA-Seq cell group 104 expressed in: AWA. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:104
  Single-cell RNA-Seq cell group 105 expressed in: AWB. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:105
  Single-cell RNA-Seq cell group 91 expressed in: ADL. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:91
  Single-cell RNA-Seq cell group 106 expressed in: ASH. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:106
  Single-cell RNA-Seq cell group 114 expressed in: ASI. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:114
  Single-cell RNA-Seq cell group 121 expressed in: ASE. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:121
  Single-cell RNA-Seq cell group 117 expressed in: ASJ. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:117
  Single-cell RNA-Seq cell group 110 expressed in: ASK. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:110
  Single-cell RNA-Seq cell group 93 expressed in: Glia_2. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:93
  Single-cell RNA-Seq cell group 118 expressed in: Glia_3. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:118
  Transcripts enriched in PDE according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:PDE_enriched
  Single-cell RNA-Seq cell group 98 expressed in: Spermatheca bag distal. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:98
  Single-cell RNA-Seq cell group 120 expressed in: OLQ. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:120
  Single-cell RNA-Seq cell group 100 expressed in: RIB and RIG. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:100
  Single-cell RNA-Seq cell group 116 expressed in: AIZ. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:116
  Single-cell RNA-Seq cell group 92 expressed in: Anal muscle. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:92
  Single-cell RNA-Seq cell group 112 expressed in: Amphid socket. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:112
  Single-cell RNA-Seq cell group 119 expressed in: BDU. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:119
  Single-cell RNA-Seq cell group 107 expressed in: AIM. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:107
  Single-cell RNA-Seq cell group 115 expressed in: Phasmid socket. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:115
  Single-cell RNA-Seq cell group 109 expressed in: IL2. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:109
  Single-cell RNA-Seq cell group 94 expressed in: AVL and DVB. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:94
  Single-cell RNA-Seq cell group 95 expressed in: RIC. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:95
  Single-cell RNA-Seq cell group 97 expressed in: Unassigned sheath cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:97
  Single-cell RNA-Seq cell group 99 expressed in: g2 (pharyngeal gland) . CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:99
  Single-cell RNA-Seq cell group 113 expressed in: HSN. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:113
  Single-cell RNA-Seq cell group 101 expressed in: RIV. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:101

0 Expression Patterns

0 Life Stages

2 Parents

Definition Name Synonym Primary Identifier
Neuron that uses dopamine (DA) as a neurotransmitter. dopaminergic neuron   WBbt:0006746
neuron of anterior and post- deirid sensillum. deirid neuron   WBbt:0006928