WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ADE, AQR, BAG, CEP, FLP, IL1 neuron, IL2 neuron, OLL, OLQ, PDE, PHA, PHB, PQR, PVR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Ciliated_non_amphid_neuron

14 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one sensory neuron, basal body, not part of a sensillum, projects into preanal gangion. PQR lineage name: QL.ap WBbt:0004096
Neuron class of one asymmetric interneuron, projects along ventral cord to ring, sends process into tail spike. PVR lineage name: Caappv WBbt:0004072
Neuron class of one sensory neuron, basal body; not part of a sensillum, projects into ring. AQR lineage name: QR.ap WBbt:0003927
Neuron class of six ciliated neurons with striated rootlets, each of which is one of two component neurons of the inner labial sensilla. IL1 neuron   WBbt:0005119
Neuron class of four neurons with ciliated endings and striated rootlets in the dorsal and ventral outer labial sensilla. OLQ   WBbt:0006848
Neuron class of two neurons with ciliated endings in the lateral outer labial sensilla. OLL   WBbt:0006847
Neuron class of two neurons, which have ciliated endings situated immediately dorsal to the lateral inner labial sensilla in the head but have no associated sheath or socket cells; they have flattened processes in this region of the cilium. FLP   WBbt:0006828
Neuron class of four neurons associated with cephalic sensilla. CEP   WBbt:0005244
Neuron class of two neurons with ciliated endings, in the head, with elliptical, closed, sheet-like processes near the cilium, which envelop a piece of hypodermis. BAG   WBbt:0006825
Neuron class of two neurons with ciliated endings in the posterior deirid sensilla. PDE postdeirid neuron WBbt:0006747
Neuron class of two sensory neurons of anterior deirids, sensory receptors in lateral alae, contain dopamine. ADE   WBbt:0005415
Neuron class of two phasmid neurons, type B. PHB   WBbt:0007808
Neuron class of two phasmid neurons, type A. PHA   WBbt:0007807
Neuron class of six ciliated neurons, each of which is one of the two component neurons of the six inner labial sensilla. IL2 neuron   WBbt:0005118

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000156 apr-1 K04G2.8 Caenorhabditis elegans
WBGene00000174 aqp-6 C32C4.2 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000265 brd-1 K04C2.4 Caenorhabditis elegans
WBGene00000275 bub-1 R06C7.8 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000387 cdc-25.2 F16B4.8 Caenorhabditis elegans
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans
WBGene00000406 cdk-4 F18H3.5 Caenorhabditis elegans
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000418 ced-4 C35D10.9 Caenorhabditis elegans
WBGene00000422 ced-8 F08F1.5 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000433 ceh-8 ZK265.4 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000453 ceh-32 W05E10.3 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000469 ces-2 ZK909.4 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000685 col-111 F29B9.9 Caenorhabditis elegans
WBGene00000773 cpf-1 F28C6.3 Caenorhabditis elegans
WBGene00000804 csc-1 Y48E1B.12 Caenorhabditis elegans
WBGene00000863 cya-1 ZK507.6 Caenorhabditis elegans
WBGene00000865 cyb-1 ZC168.4 Caenorhabditis elegans
WBGene00000868 cyb-3 T06E6.2 Caenorhabditis elegans
WBGene00000870 cyd-1 Y38F1A.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule