WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in mc2DL, mc2DR, mc2V according to single cell RNAseq.
Primary Identifier  WBPaper00061340:mc2
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Pharyngeal marginal cell mc2DR lineage name: ABaraappapp WBbt:0004297
Pharyngeal marginal cell mc2DL lineage name: ABaraapaapp WBbt:0004298
Pharyngeal marginal cell mc2V lineage name: ABarapapppa WBbt:0004296

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
WBGene00000429 ceh-2 C27A12.5 Caenorhabditis elegans
WBGene00000660 col-85 T21B4.2 Caenorhabditis elegans
WBGene00000962 dhc-1 T21E12.4 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00001109 dsl-7 F15B9.9 Caenorhabditis elegans
WBGene00001193 egl-26 C23H3.1 Caenorhabditis elegans
WBGene00001244 elo-6 F41H10.8 Caenorhabditis elegans
WBGene00001247 elo-9 Y53F4B.2 Caenorhabditis elegans
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
WBGene00001374 exp-2 F12F3.1 Caenorhabditis elegans
WBGene00001397 fat-5 W06D12.3 Caenorhabditis elegans
WBGene00001410 feh-1 Y54F10AM.2 Caenorhabditis elegans
WBGene00001438 fkh-6 B0286.5 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001526 gck-1 T19A5.2 Caenorhabditis elegans
WBGene00001527 gcs-1 F37B12.2 Caenorhabditis elegans
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
WBGene00001604 gln-3 Y105C5B.28 Caenorhabditis elegans
WBGene00001609 glp-1 F02A9.6 Caenorhabditis elegans
WBGene00001627 gly-2 C55B7.2 Caenorhabditis elegans
WBGene00001666 gpa-4 T07A9.7 Caenorhabditis elegans
WBGene00001751 gst-3 K08F4.11 Caenorhabditis elegans
WBGene00002007 hsp-3 C15H9.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule