WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in SMBDL, SMBDR, SMBVL, SMBVR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:SMB
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4 Anatomy Terms

Definition Name Synonym Primary Identifier
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMBVL lineage name: ABalpapappp WBbt:0004974
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMBVR lineage name: ABarappappp WBbt:0004973
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMBDL lineage name: ABalpapapapp WBbt:0004976
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMBDR lineage name: ABarappapapp WBbt:0004975

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans
WBGene00000175 aqp-7 M02F4.8 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000434 ceh-9 Y65B4BR.9 Caenorhabditis elegans
WBGene00000447 ceh-24 F55B12.1 Caenorhabditis elegans
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans
WBGene00000478 cfz-2 F27E11.3 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00000682 col-108 Y41D4A.2 Caenorhabditis elegans
WBGene00001101 dsh-1 C34F11.9 Caenorhabditis elegans
WBGene00001145 eat-16 C16C2.2 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001411 fem-1 F35D6.1 Caenorhabditis elegans
WBGene00001433 fkb-8 Y18D10A.25 Caenorhabditis elegans
WBGene00001434 fkh-2 T14G12.4 Caenorhabditis elegans
WBGene00001448 flp-5 C03G5.7 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans
WBGene00001507 fut-4 K12H6.3 Caenorhabditis elegans
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
WBGene00001612 glr-1 C06E1.4 Caenorhabditis elegans
WBGene00001616 glr-5 ZC196.7 Caenorhabditis elegans
WBGene00001671 gpa-9 F56H9.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule