WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in marginal cell according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Pharyngeal_marginal_cell
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
a type of pharyngeal cell that connects basement membrane to the apices of triangle-shaped pharyngeal lumen. marginal cell   WBbt:0003673

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans
WBGene00000429 ceh-2 C27A12.5 Caenorhabditis elegans
WBGene00000445 ceh-22 F29F11.5 Caenorhabditis elegans
WBGene00000453 ceh-32 W05E10.3 Caenorhabditis elegans
WBGene00000469 ces-2 ZK909.4 Caenorhabditis elegans
WBGene00000512 ckb-2 B0285.9 Caenorhabditis elegans
WBGene00000585 cogc-2 C06G3.10 Caenorhabditis elegans
WBGene00000800 cars-1 Y23H5A.7 Caenorhabditis elegans
WBGene00000802 crt-1 Y38A10A.5 Caenorhabditis elegans
WBGene00000933 dap-3 C14A4.2 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00000995 die-1 C18D1.1 Caenorhabditis elegans
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00001162 efl-2 Y48C3A.17 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001193 egl-26 C23H3.1 Caenorhabditis elegans
WBGene00001244 elo-6 F41H10.8 Caenorhabditis elegans
WBGene00001303 sec-61.G F32D8.6 Caenorhabditis elegans
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
WBGene00001677 gpa-15 M04C7.1 Caenorhabditis elegans
WBGene00002007 hsp-3 C15H9.6 Caenorhabditis elegans
WBGene00002018 hsp-16.41 Y46H3A.2 Caenorhabditis elegans
WBGene00002021 hsp-17 F52E1.7 Caenorhabditis elegans
WBGene00002035 hum-1 F29D10.4 Caenorhabditis elegans
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
WBGene00002043 hyl-1 C09G4.1 Caenorhabditis elegans
WBGene00002070 ile-1 K07A1.8 Caenorhabditis elegans
WBGene00002081 ina-1 F54G8.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule